IL_6SJ6_072

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUUAGUAC*GGACCGG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|C|2678
6SJ6|1|A|U|2679
6SJ6|1|A|U|2680
6SJ6|1|A|A|2681
6SJ6|1|A|G|2682
6SJ6|1|A|U|2683
6SJ6|1|A|A|2684
6SJ6|1|A|C|2685
*
6SJ6|1|A|G|2690
6SJ6|1|A|G|2691
6SJ6|1|A|A|2692
6SJ6|1|A|C|2693
6SJ6|1|A|C|2694
6SJ6|1|A|G|2695
6SJ6|1|A|G|2696

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 9

Ribosomal silencing factor RsfS

Chain N

50S ribosomal protein L14