IL_6SJ6_090

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGACACUCUAUACGGAGUUACAAAGGACGA*UUGUCUCUCUUGAGUGGAUCC

Length

51 nucleotides

Bulged bases

6SJ6|1|A|C|308, 6SJ6|1|A|G|316, 6SJ6|1|A|G|317, 6SJ6|1|A|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|G|303
6SJ6|1|A|G|304
6SJ6|1|A|A|305
6SJ6|1|A|C|306
6SJ6|1|A|A|307
6SJ6|1|A|C|308
6SJ6|1|A|U|309
6SJ6|1|A|C|310
6SJ6|1|A|U|311
6SJ6|1|A|A|312
6SJ6|1|A|U|313
6SJ6|1|A|A|314
6SJ6|1|A|C|315
6SJ6|1|A|G|316
6SJ6|1|A|G|317
6SJ6|1|A|A|318
6SJ6|1|A|G|319
6SJ6|1|A|U|320
6SJ6|1|A|U|321
6SJ6|1|A|A|322
6SJ6|1|A|C|323
6SJ6|1|A|A|324
6SJ6|1|A|A|325
6SJ6|1|A|A|326
6SJ6|1|A|G|327
6SJ6|1|A|G|328
6SJ6|1|A|A|329
6SJ6|1|A|C|330
6SJ6|1|A|G|331
6SJ6|1|A|A|332
*
6SJ6|1|A|U|394
6SJ6|1|A|U|395
6SJ6|1|A|G|396
6SJ6|1|A|U|397
6SJ6|1|A|C|398
6SJ6|1|A|U|399
6SJ6|1|A|C|400
6SJ6|1|A|U|401
6SJ6|1|A|C|402
6SJ6|1|A|U|403
6SJ6|1|A|U|404
6SJ6|1|A|G|405
6SJ6|1|A|A|406
6SJ6|1|A|G|407
6SJ6|1|A|U|408
6SJ6|1|A|G|409
6SJ6|1|A|G|410
6SJ6|1|A|A|411
6SJ6|1|A|U|412
6SJ6|1|A|C|413
6SJ6|1|A|C|414

Current chains

Chain A

23S ribosomal RNA

Nearby chains