IL_6SJ6_096

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GAGGUAGAG*CUCCGAAUGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|G|901
6SJ6|1|A|A|902
6SJ6|1|A|G|903
6SJ6|1|A|G|904
6SJ6|1|A|U|905
6SJ6|1|A|A|906
6SJ6|1|A|G|907
6SJ6|1|A|A|908
6SJ6|1|A|G|909
*
6SJ6|1|A|C|957
6SJ6|1|A|U|958
6SJ6|1|A|C|959
6SJ6|1|A|C|960
6SJ6|1|A|G|961
6SJ6|1|A|A|962
6SJ6|1|A|A|963
6SJ6|1|A|U|964
6SJ6|1|A|G|965
6SJ6|1|A|C|966

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L30

Chain B

5S ribosomal RNA; 5S rRNA

Chain P

50S ribosomal protein L16

Chain Y

50S ribosomal protein L25

Chain Z

50S ribosomal protein L27