IL_6SJ6_097

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

AUAUAUGUUAAGUG*CUAAACAUAUU

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|A|1055
6SJ6|1|A|U|1056
6SJ6|1|A|A|1057
6SJ6|1|A|U|1058
6SJ6|1|A|A|1059
6SJ6|1|A|U|1060
6SJ6|1|A|G|1061
6SJ6|1|A|U|1062
6SJ6|1|A|U|1063
6SJ6|1|A|A|1064
6SJ6|1|A|A|1065
6SJ6|1|A|G|1066
6SJ6|1|A|U|1067
6SJ6|1|A|G|1068
*
6SJ6|1|A|C|1184
6SJ6|1|A|U|1185
6SJ6|1|A|A|1186
6SJ6|1|A|A|1187
6SJ6|1|A|A|1188
6SJ6|1|A|C|1189
6SJ6|1|A|A|1190
6SJ6|1|A|U|1191
6SJ6|1|A|A|1192
6SJ6|1|A|U|1193
6SJ6|1|A|U|1194

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L13

Chain T

50S ribosomal protein L20