IL_6SJ6_100

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUAAGCUGAGG*CGUAGGCGAUG

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|C|1388
6SJ6|1|A|U|1389
6SJ6|1|A|A|1390
6SJ6|1|A|A|1391
6SJ6|1|A|G|1392
6SJ6|1|A|C|1393
6SJ6|1|A|U|1394
6SJ6|1|A|G|1395
6SJ6|1|A|A|1396
6SJ6|1|A|G|1397
6SJ6|1|A|G|1398
*
6SJ6|1|A|C|1407
6SJ6|1|A|G|1408
6SJ6|1|A|U|1409
6SJ6|1|A|A|1410
6SJ6|1|A|G|1411
6SJ6|1|A|G|1412
6SJ6|1|A|C|1413
6SJ6|1|A|G|1414
6SJ6|1|A|A|1415
6SJ6|1|A|U|1416
6SJ6|1|A|G|1417

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L28

Chain 6

50S ribosomal protein L34

Chain D

50S ribosomal protein L2