IL_6SJ6_106

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CGGCUC*GCGAGCUGG

Length

15 nucleotides

Bulged bases

6SJ6|1|A|A|2604

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|C|2534
6SJ6|1|A|G|2535
6SJ6|1|A|G|2536
6SJ6|1|A|C|2537
6SJ6|1|A|U|2538
6SJ6|1|A|C|2539
*
6SJ6|1|A|G|2601
6SJ6|1|A|C|2602
6SJ6|1|A|G|2603
6SJ6|1|A|A|2604
6SJ6|1|A|G|2605
6SJ6|1|A|C|2606
6SJ6|1|A|U|2607
6SJ6|1|A|G|2608
6SJ6|1|A|G|2609

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L32

Chain E

50S ribosomal protein L3