IL_6SJ6_109

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CCUCUGGU*GCUAUG

Length

14 nucleotides

Bulged bases

6SJ6|1|A|U|2753

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|C|2707
6SJ6|1|A|C|2708
6SJ6|1|A|U|2709
6SJ6|1|A|C|2710
6SJ6|1|A|U|2711
6SJ6|1|A|G|2712
6SJ6|1|A|G|2713
6SJ6|1|A|U|2714
*
6SJ6|1|A|G|2749
6SJ6|1|A|C|2750
6SJ6|1|A|U|2751
6SJ6|1|A|A|2752
6SJ6|1|A|U|2753
6SJ6|1|A|G|2754

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L3

Chain N

50S ribosomal protein L14

Chain S

50S ribosomal protein L19