IL_6SJ6_111

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UUGUC*GGCAUAG

Length

12 nucleotides

Bulged bases

6SJ6|1|A|U|2739, 6SJ6|1|A|A|2740

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|U|2722
6SJ6|1|A|U|2723
6SJ6|1|A|G|2724
6SJ6|1|A|U|2725
6SJ6|1|A|C|2726
*
6SJ6|1|A|G|2735
6SJ6|1|A|G|2736
6SJ6|1|A|C|2737
6SJ6|1|A|A|2738
6SJ6|1|A|U|2739
6SJ6|1|A|A|2740
6SJ6|1|A|G|2741

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L17

Chain S

50S ribosomal protein L19