IL_6SJ6_112
3D structure
- PDB id
- 6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- ACCU*AGAAGU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SJ6_112 not in the Motif Atlas
- Homologous match to IL_7A0S_104
- Geometric discrepancy: 0.5421
- The information below is about IL_7A0S_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05192.5
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6SJ6|1|B|A|27
6SJ6|1|B|C|28
6SJ6|1|B|C|29
6SJ6|1|B|U|30
*
6SJ6|1|B|A|48
6SJ6|1|B|G|49
6SJ6|1|B|A|50
6SJ6|1|B|A|51
6SJ6|1|B|G|52
6SJ6|1|B|U|53
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L18
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