IL_6SJ6_120

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUAUAAUCGUUUUAAU*AUAGAAAAUAG

Length

27 nucleotides

Bulged bases

6SJ6|1|A|G|1453, 6SJ6|1|A|U|1454, 6SJ6|1|A|U|1456, 6SJ6|1|A|A|1630

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|C|1445
6SJ6|1|A|U|1446
6SJ6|1|A|A|1447
6SJ6|1|A|U|1448
6SJ6|1|A|A|1449
6SJ6|1|A|A|1450
6SJ6|1|A|U|1451
6SJ6|1|A|C|1452
6SJ6|1|A|G|1453
6SJ6|1|A|U|1454
6SJ6|1|A|U|1455
6SJ6|1|A|U|1456
6SJ6|1|A|U|1457
6SJ6|1|A|A|1458
6SJ6|1|A|A|1459
6SJ6|1|A|U|1460
*
6SJ6|1|A|A|1628
6SJ6|1|A|U|1629
6SJ6|1|A|A|1630
6SJ6|1|A|G|1631
6SJ6|1|A|A|1632
6SJ6|1|A|A|1633
6SJ6|1|A|A|1634
6SJ6|1|A|A|1635
6SJ6|1|A|U|1636
6SJ6|1|A|A|1637
6SJ6|1|A|G|1638

Current chains

Chain A

23S ribosomal RNA

Nearby chains