IL_6SKF_036

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GGGAGAG*UGGAAC

Length

13 nucleotides

Bulged bases

6SKF|1|Aa|A|611

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|Aa|G|606
6SKF|1|Aa|G|607
6SKF|1|Aa|G|608
6SKF|1|Aa|A|609
6SKF|1|Aa|G|610
6SKF|1|Aa|A|611
6SKF|1|Aa|G|612
*
6SKF|1|Aa|U|686
6SKF|1|Aa|G|687
6SKF|1|Aa|G|688
6SKF|1|Aa|A|689
6SKF|1|Aa|A|690
6SKF|1|Aa|C|691

Current chains

Chain Aa

16S rRNA

Nearby chains

Chain Ad

30S ribosomal protein S3Ae

Chain Aq

30S ribosomal protein S15

Chain Ax

30S ribosomal protein S27e