IL_6SKF_038

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GUACC*G(OMG)GAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|Aa|G|620
6SKF|1|Aa|U|621
6SKF|1|Aa|A|622
6SKF|1|Aa|C|623
6SKF|1|Aa|C|624
*
6SKF|1|Aa|G|658
6SKF|1|Aa|OMG|659
6SKF|1|Aa|G|660
6SKF|1|Aa|A|661
6SKF|1|Aa|C|662

Current chains

Chain Aa

16S rRNA

Nearby chains

Chain Ad

30S ribosomal protein S3Ae

Chain An

30S ribosomal protein S11

Chain BC

50S ribosomal protein L2