IL_6SKF_061

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GACAAUG*CCUAAAC

Length

14 nucleotides

Bulged bases

6SKF|1|Aa|U|1238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|Aa|G|1199
6SKF|1|Aa|A|1200
6SKF|1|Aa|C|1201
6SKF|1|Aa|A|1202
6SKF|1|Aa|A|1203
6SKF|1|Aa|U|1204
6SKF|1|Aa|G|1205
*
6SKF|1|Aa|C|1236
6SKF|1|Aa|C|1237
6SKF|1|Aa|U|1238
6SKF|1|Aa|A|1239
6SKF|1|Aa|A|1240
6SKF|1|Aa|A|1241
6SKF|1|Aa|C|1242

Current chains

Chain Aa

16S rRNA

Nearby chains

Chain Ai

30S ribosomal protein S7

Chain Al

30S ribosomal protein S9

Chain Am

30S ribosomal protein S10

Chain Ar

30S ribosomal protein S14 type Z

Chain Av

30S ribosomal protein S19e