IL_6SKF_064

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CGGAUC*GUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|Aa|C|1255
6SKF|1|Aa|G|1256
6SKF|1|Aa|G|1257
6SKF|1|Aa|A|1258
6SKF|1|Aa|U|1259
6SKF|1|Aa|C|1260
*
6SKF|1|Aa|G|1281
6SKF|1|Aa|U|1282
6SKF|1|Aa|G|1283
6SKF|1|Aa|A|1284
6SKF|1|Aa|A|1285
6SKF|1|Aa|G|1286

Current chains

Chain Aa

16S rRNA

Nearby chains

Chain Ai

30S ribosomal protein S7

Chain Ap

30S ribosomal protein S13

Chain Av

30S ribosomal protein S19e