IL_6SKF_117

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

UGAA(OMG)UC*G(A2M)UGGAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|BA|U|829
6SKF|1|BA|G|830
6SKF|1|BA|A|831
6SKF|1|BA|A|832
6SKF|1|BA|OMG|833
6SKF|1|BA|U|834
6SKF|1|BA|C|835
*
6SKF|1|BA|G|848
6SKF|1|BA|A2M|849
6SKF|1|BA|U|850
6SKF|1|BA|G|851
6SKF|1|BA|G|852
6SKF|1|BA|A|853
6SKF|1|BA|G|854

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BC

50S ribosomal protein L2

Chain BS

50S ribosomal protein L19e

Chain Bg

50S ribosomal protein L37Ae