IL_6SKF_128

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GUUUAGG*CGGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|BA|G|1006
6SKF|1|BA|U|1007
6SKF|1|BA|U|1008
6SKF|1|BA|U|1009
6SKF|1|BA|A|1010
6SKF|1|BA|G|1011
6SKF|1|BA|G|1012
*
6SKF|1|BA|C|1026
6SKF|1|BA|G|1027
6SKF|1|BA|G|1028
6SKF|1|BA|C|1029

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BF

50S ribosomal protein L5