IL_6SKF_135

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CUUAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|BA|C|1175
6SKF|1|BA|U|1176
6SKF|1|BA|U|1177
6SKF|1|BA|A|1178
6SKF|1|BA|G|1179
6SKF|1|BA|A|1180
6SKF|1|BA|C|1181
6SKF|1|BA|A|1182
6SKF|1|BA|G|1183
6SKF|1|BA|C|1184
*
6SKF|1|BA|G|1239
6SKF|1|BA|U|1240
6SKF|1|BA|C|1241
6SKF|1|BA|G|1242
6SKF|1|BA|A|1243
6SKF|1|BA|G|1244

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BG

50S ribosomal protein L6

Chain BT

50S ribosomal protein L18Ae