IL_6SKF_158

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

G(OMG)GAAAC*GGC

Length

10 nucleotides

Bulged bases

6SKF|1|BA|G|1800

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|BA|G|1798
6SKF|1|BA|OMG|1799
6SKF|1|BA|G|1800
6SKF|1|BA|A|1801
6SKF|1|BA|A|1802
6SKF|1|BA|A|1803
6SKF|1|BA|C|1804
*
6SKF|1|BA|G|2117
6SKF|1|BA|G|2118
6SKF|1|BA|C|2119

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BV

50S ribosomal protein L22

Chain Bc

50S ribosomal protein L31e