IL_6SKF_224

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GAAGG*C(4AC)GAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4AC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|BA|G|2982
6SKF|1|BA|A|2983
6SKF|1|BA|A|2984
6SKF|1|BA|G|2985
6SKF|1|BA|G|2986
*
6SKF|1|BA|C|2991
6SKF|1|BA|4AC|2992
6SKF|1|BA|G|2993
6SKF|1|BA|A|2994
6SKF|1|BA|C|2995

Current chains

Chain BA

23S rRNA

Nearby chains

Chain Ak

30S ribosomal protein S8e

Chain BS

50S ribosomal protein L19e