IL_6SKF_265

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CCC(OMU)AAGGUCGGCUC*GAGUG

Length

20 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|BA|C|2386
6SKF|1|BA|C|2387
6SKF|1|BA|C|2388
6SKF|1|BA|OMU|2389
6SKF|1|BA|A|2390
6SKF|1|BA|A|2391
6SKF|1|BA|G|2392
6SKF|1|BA|G|2393
6SKF|1|BA|U|2394
6SKF|1|BA|C|2395
6SKF|1|BA|G|2396
6SKF|1|BA|G|2397
6SKF|1|BA|C|2398
6SKF|1|BA|U|2399
6SKF|1|BA|C|2400
*
6SKF|1|BA|G|2424
6SKF|1|BA|A|2425
6SKF|1|BA|G|2426
6SKF|1|BA|U|2427
6SKF|1|BA|G|2428

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BF

50S ribosomal protein L5

Chain BQ

50S ribosomal protein L18

Chain BU

50S ribosomal protein L21e

Chain Bl

50S ribosomal protein L44e