IL_6SKG_094
3D structure
- PDB id
- 6SKG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CGAAG*CGAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SKG_094 not in the Motif Atlas
- Geometric match to IL_5J7L_303
- Geometric discrepancy: 0.1419
- The information below is about IL_5J7L_303
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
6SKG|1|BA|C|598
6SKG|1|BA|G|599
6SKG|1|BA|A|600
6SKG|1|BA|A|601
6SKG|1|BA|G|602
*
6SKG|1|BA|C|626
6SKG|1|BA|G|627
6SKG|1|BA|A|628
6SKG|1|BA|G|629
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain Ba
- 50S ribosomal protein L30
- Chain Bd
- 50S ribosomal protein L32e
- Chain Bf
- Ribosomal protein eL35A
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