IL_6SPF_035
3D structure
- PDB id
- 6SPF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- GGUAAACG*CGGAAGAUGUAACGGGGC
- Length
- 26 nucleotides
- Bulged bases
- 6SPF|1|A|A|1117, 6SPF|1|A|U|1120
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPF|1|A|G|1014
6SPF|1|A|G|1015
6SPF|1|A|U|1016
6SPF|1|A|A|1017
6SPF|1|A|A|1018
6SPF|1|A|A|1019
6SPF|1|A|C|1020
6SPF|1|A|G|1021
*
6SPF|1|A|C|1113
6SPF|1|A|G|1114
6SPF|1|A|G|1115
6SPF|1|A|A|1116
6SPF|1|A|A|1117
6SPF|1|A|G|1118
6SPF|1|A|A|1119
6SPF|1|A|U|1120
6SPF|1|A|G|1121
6SPF|1|A|U|1122
6SPF|1|A|A|1123
6SPF|1|A|A|1124
6SPF|1|A|C|1125
6SPF|1|A|G|1126
6SPF|1|A|G|1127
6SPF|1|A|G|1128
6SPF|1|A|G|1129
6SPF|1|A|C|1130
Current chains
- Chain A
- Pseudomonas aeruginosa strain PAO1 23S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L36
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
- Chain M
- 50S ribosomal protein L16
Coloring options: