IL_6SPF_155

3D structure

PDB id

6SPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UAAGGUGGUAG*CGAGAGCUGAUG

Length

23 nucleotides

Bulged bases

6SPF|1|A|U|1510

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPF|1|A|U|1455
6SPF|1|A|A|1456
6SPF|1|A|A|1457
6SPF|1|A|G|1458
6SPF|1|A|G|1459
6SPF|1|A|U|1460
6SPF|1|A|G|1461
6SPF|1|A|G|1462
6SPF|1|A|U|1463
6SPF|1|A|A|1464
6SPF|1|A|G|1465
*
6SPF|1|A|C|1500
6SPF|1|A|G|1501
6SPF|1|A|A|1502
6SPF|1|A|G|1503
6SPF|1|A|A|1504
6SPF|1|A|G|1505
6SPF|1|A|C|1506
6SPF|1|A|U|1507
6SPF|1|A|G|1508
6SPF|1|A|A|1509
6SPF|1|A|U|1510
6SPF|1|A|G|1511

Current chains

Chain A

Pseudomonas aeruginosa strain PAO1 23S ribosomal RNA

Nearby chains