IL_6SPG_081

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GCCUG*CAUGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|A|G|2089
6SPG|1|A|C|2090
6SPG|1|A|C|2091
6SPG|1|A|U|2092
6SPG|1|A|G|2093
*
6SPG|1|A|C|2170
6SPG|1|A|A|2171
6SPG|1|A|U|2172
6SPG|1|A|G|2173
6SPG|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9