IL_6SPG_083

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GCUUUGAAGCGUG*CGCGUGGAGC

Length

23 nucleotides

Bulged bases

6SPG|1|A|C|2116, 6SPG|1|A|U|2117, 6SPG|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|A|G|2115
6SPG|1|A|C|2116
6SPG|1|A|U|2117
6SPG|1|A|U|2118
6SPG|1|A|U|2119
6SPG|1|A|G|2120
6SPG|1|A|A|2121
6SPG|1|A|A|2122
6SPG|1|A|G|2123
6SPG|1|A|C|2124
6SPG|1|A|G|2125
6SPG|1|A|U|2126
6SPG|1|A|G|2127
*
6SPG|1|A|C|2138
6SPG|1|A|G|2139
6SPG|1|A|C|2140
6SPG|1|A|G|2141
6SPG|1|A|U|2142
6SPG|1|A|G|2143
6SPG|1|A|G|2144
6SPG|1|A|A|2145
6SPG|1|A|G|2146
6SPG|1|A|C|2147

Current chains

Chain A

23S ribosomal RNA

Nearby chains