IL_6SPG_128

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GACAAUGG*CUGAUC

Length

14 nucleotides

Bulged bases

6SPG|1|a|G|382

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|a|G|364
6SPG|1|a|A|365
6SPG|1|a|C|366
6SPG|1|a|A|367
6SPG|1|a|A|368
6SPG|1|a|U|369
6SPG|1|a|G|370
6SPG|1|a|G|371
*
6SPG|1|a|C|380
6SPG|1|a|U|381
6SPG|1|a|G|382
6SPG|1|a|A|383
6SPG|1|a|U|384
6SPG|1|a|C|385

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16