IL_6SPG_175

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GGGGUC*GACUUAC

Length

13 nucleotides

Bulged bases

6SPG|1|A|G|870, 6SPG|1|A|A|881

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|A|G|869
6SPG|1|A|G|870
6SPG|1|A|G|871
6SPG|1|A|G|872
6SPG|1|A|U|873
6SPG|1|A|C|874
*
6SPG|1|A|G|880
6SPG|1|A|A|881
6SPG|1|A|C|882
6SPG|1|A|U|883
6SPG|1|A|U|884
6SPG|1|A|A|885
6SPG|1|A|C|886

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L25