IL_6SPG_187

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GGUAGAGGG*CCUGGACU

Length

17 nucleotides

Bulged bases

6SPG|1|a|A|659

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|a|G|654
6SPG|1|a|G|655
6SPG|1|a|U|656
6SPG|1|a|A|657
6SPG|1|a|G|658
6SPG|1|a|A|659
6SPG|1|a|G|660
6SPG|1|a|G|661
6SPG|1|a|G|662
*
6SPG|1|a|C|732
6SPG|1|a|C|733
6SPG|1|a|U|734
6SPG|1|a|G|735
6SPG|1|a|G|736
6SPG|1|a|A|737
6SPG|1|a|C|738
6SPG|1|a|U|739

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain f

30S ribosomal protein S6

Chain o

30S ribosomal protein S15

Chain r

30S ribosomal protein S18

Chain u

30S ribosomal protein S21