IL_6SPG_190

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GGUACAAAG*CAUAAAACC

Length

18 nucleotides

Bulged bases

6SPG|1|a|U|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|a|G|1239
6SPG|1|a|G|1240
6SPG|1|a|U|1241
6SPG|1|a|A|1242
6SPG|1|a|C|1243
6SPG|1|a|A|1244
6SPG|1|a|A|1245
6SPG|1|a|A|1246
6SPG|1|a|G|1247
*
6SPG|1|a|C|1278
6SPG|1|a|A|1279
6SPG|1|a|U|1280
6SPG|1|a|A|1281
6SPG|1|a|A|1282
6SPG|1|a|A|1283
6SPG|1|a|A|1284
6SPG|1|a|C|1285
6SPG|1|a|C|1286

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain m

30S ribosomal protein S13