IL_6SV4_213
3D structure
- PDB id
- 6SV4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of SDD1-stalled collided trisome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAAAAAUUA*UAUAUUAGC
- Length
- 19 nucleotides
- Bulged bases
- 6SV4|1|2c|U|794, 6SV4|1|2c|U|795
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SV4|1|2c|G|751
6SV4|1|2c|A|752
6SV4|1|2c|A|753
6SV4|1|2c|A|754
6SV4|1|2c|A|755
6SV4|1|2c|A|756
6SV4|1|2c|A|757
6SV4|1|2c|U|758
6SV4|1|2c|U|759
6SV4|1|2c|A|760
*
6SV4|1|2c|U|790
6SV4|1|2c|A|791
6SV4|1|2c|U|792
6SV4|1|2c|A|793
6SV4|1|2c|U|794
6SV4|1|2c|U|795
6SV4|1|2c|A|796
6SV4|1|2c|G|797
6SV4|1|2c|C|798
Current chains
- Chain 2c
- 18S rRNA
Nearby chains
- Chain Sc
- 40S ribosomal protein S4-A
- Chain Wc
- 40S ribosomal protein S9-A
- Chain Xc
- 40S ribosomal protein S11-A
- Chain bc
- 40S ribosomal protein S22-A
Coloring options: