IL_6SWA_202
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GACC*GC
- Length
- 6 nucleotides
- Bulged bases
- 6SWA|1|q|C|4311
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SWA_202 not in the Motif Atlas
- Geometric match to IL_5J7L_032
- Geometric discrepancy: 0.2089
- The information below is about IL_5J7L_032
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
6SWA|1|q|G|4309
6SWA|1|q|A|4310
6SWA|1|q|C|4311
6SWA|1|q|C|4312
*
6SWA|1|q|G|4326
6SWA|1|q|C|4327
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain K
- 60S ribosomal protein L13
- Chain P
- 60S ribosomal protein L18
- Chain Y
- 60S ribosomal protein L27a
- Chain m
- MCG115063, isoform CRA_a
Coloring options: