IL_6SXO_004

3D structure

PDB id

6SXO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCGAAGC*GUGGAUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SXO|1|L5|G|2920
6SXO|1|L5|C|2921
6SXO|1|L5|G|2922
6SXO|1|L5|A|2923
6SXO|1|L5|A|2924
6SXO|1|L5|G|2925
6SXO|1|L5|C|2926
*
6SXO|1|L5|G|3267
6SXO|1|L5|U|3268
6SXO|1|L5|G|3269
6SXO|1|L5|G|3270
6SXO|1|L5|A|3271
6SXO|1|L5|U|3272
6SXO|1|L5|C|3273

Current chains

Chain L5

28S ribosomal RNA including ES27L-B (2839-3265)

Nearby chains