IL_6T3S_006

3D structure

PDB id

6T3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon

Experimental method

X-RAY DIFFRACTION

Resolution

3.28 Å

Loop

Sequence

AUAUGAGGC*GUAAU

Length

14 nucleotides

Bulged bases

6T3S|1|A|U|152

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T3S|1|A|A|149
6T3S|1|A|U|150
6T3S|1|A|A|151
6T3S|1|A|U|152
6T3S|1|A|G|153
6T3S|1|A|A|154
6T3S|1|A|G|155
6T3S|1|A|G|156
6T3S|1|A|C|157
*
6T3S|1|A|G|220
6T3S|1|A|U|221
6T3S|1|A|A|222
6T3S|1|A|A|224
6T3S|1|A|U|225

Current chains

Chain A

Group IIC Intron Ribozyme

Nearby chains