IL_6T3S_017

3D structure

PDB id

6T3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon

Experimental method

X-RAY DIFFRACTION

Resolution

3.28 Å

Loop

Sequence

CUAGGUAU*GUACAGAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T3S|1|A|C|157
6T3S|1|A|U|158
6T3S|1|A|A|159
6T3S|1|A|G|160
6T3S|1|A|G|161
6T3S|1|A|U|162
6T3S|1|A|A|163
6T3S|1|A|U|164
*
6T3S|1|A|G|213
6T3S|1|A|U|214
6T3S|1|A|A|215
6T3S|1|A|C|216
6T3S|1|A|A|217
6T3S|1|A|G|218
6T3S|1|A|A|219
6T3S|1|A|G|220

Current chains

Chain A

Group IIC Intron Ribozyme

Nearby chains