IL_6T4Q_138
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 6T4Q|1|C2|A|468
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T4Q_138 not in the Motif Atlas
- Geometric match to IL_4V88_386
- Geometric discrepancy: 0.138
- The information below is about IL_4V88_386
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
6T4Q|1|C2|U|37
6T4Q|1|C2|C|38
6T4Q|1|C2|A|39
6T4Q|1|C2|A|40
6T4Q|1|C2|A|41
*
6T4Q|1|C2|U|466
6T4Q|1|C2|G|467
6T4Q|1|C2|A|468
6T4Q|1|C2|C|469
6T4Q|1|C2|A|470
6T4Q|1|C2|A|471
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4-A
- Chain SJ
- 40S ribosomal protein S9-A
- Chain SY
- 40S ribosomal protein S24-A
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