IL_6T4Q_139
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 6T4Q|1|C2|A|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T4Q_139 not in the Motif Atlas
- Geometric match to IL_4V88_387
- Geometric discrepancy: 0.1025
- The information below is about IL_4V88_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77761.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6T4Q|1|C2|G|42
6T4Q|1|C2|A|43
6T4Q|1|C2|U|44
6T4Q|1|C2|U|45
6T4Q|1|C2|A|46
6T4Q|1|C2|A|47
6T4Q|1|C2|G|48
*
6T4Q|1|C2|C|431
6T4Q|1|C2|G|432
6T4Q|1|C2|C|433
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SX
- 40S ribosomal protein S23-A
Coloring options: