IL_6T4Q_146
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UAUAAC*GCUAAUA
- Length
- 13 nucleotides
- Bulged bases
- 6T4Q|1|C2|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T4Q_146 not in the Motif Atlas
- Geometric match to IL_4LFB_009
- Geometric discrepancy: 0.1876
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_00680.1
- Basepair signature
- cWW-L-R-tWH-L-R-L-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6T4Q|1|C2|U|144
6T4Q|1|C2|A|145
6T4Q|1|C2|U|146
6T4Q|1|C2|A|147
6T4Q|1|C2|A|148
6T4Q|1|C2|C|149
*
6T4Q|1|C2|G|165
6T4Q|1|C2|C|166
6T4Q|1|C2|U|167
6T4Q|1|C2|A|168
6T4Q|1|C2|A|169
6T4Q|1|C2|U|170
6T4Q|1|C2|A|171
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain LW
- 60S ribosomal protein L24-A
- Chain SG
- 40S ribosomal protein S6-A
- Chain SY
- 40S ribosomal protein S24-A
Coloring options: