IL_6T59_006
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T59_006 not in the Motif Atlas
- Homologous match to IL_8C3A_005
- Geometric discrepancy: 0.183
- The information below is about IL_8C3A_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_35728.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6T59|1|54|C|30
6T59|1|54|U|31
6T59|1|54|G|32
6T59|1|54|A|33
6T59|1|54|A|34
6T59|1|54|U|35
6T59|1|54|U|36
6T59|1|54|U|37
*
6T59|1|54|A|44
6T59|1|54|U|45
6T59|1|54|U|46
6T59|1|54|A|47
6T59|1|54|G|48
6T59|1|54|U|49
6T59|1|54|C|50
6T59|1|54|A|51
6T59|1|54|G|52
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain L3
- eL13
- Chain N3
- Ribosomal protein L15
- Chain a3
- uL15
- Chain j3
- Ribosomal protein L37
- Chain o3
- eL42
Coloring options: