IL_6T59_052
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GGUC*GUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T59_052 not in the Motif Atlas
- Homologous match to IL_8C3A_034
- Geometric discrepancy: 0.0966
- The information below is about IL_8C3A_034
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_63959.1
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
6T59|1|54|G|1586
6T59|1|54|G|1587
6T59|1|54|U|1588
6T59|1|54|C|1589
*
6T59|1|54|G|1605
6T59|1|54|U|1606
6T59|1|54|C|1607
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain j3
- Ribosomal protein L37
Coloring options: