IL_6T59_088

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

6T59|1|54|A|2725

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6T59_088 not in the Motif Atlas

Geometric match to IL_7A0S_012

Geometric discrepancy: 0.3476

The information below is about IL_7A0S_012

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

6T59|1|54|C|2613
6T59|1|54|C|2614
*
6T59|1|54|G|2724
6T59|1|54|A|2725
6T59|1|54|G|2726

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain R3

eL19

Chain g3

eL34