Loop IL_6T59

3D structure

PDB id: 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å

Loop

Sequence: UAUAGACAGCAGGAUG*CGCUAAGGAGUGUGUAACAACUCACCUGCCGAA
Length: 49 nucleotides
Bulged bases: 6T59|1|54|A|1960, 6T59|1|54|U|1971, 6T59|1|54|A|2002
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6T59|1|54|U|1957
6T59|1|54|A|1958
6T59|1|54|U|1959
6T59|1|54|A|1960
6T59|1|54|G|1961
6T59|1|54|A|1962
6T59|1|54|C|1963
6T59|1|54|A|1964
6T59|1|54|G|1965
6T59|1|54|C|1966
6T59|1|54|A|1967
6T59|1|54|G|1968
6T59|1|54|G|1969
6T59|1|54|A|1970
6T59|1|54|U|1971
6T59|1|54|G|1972
*
6T59|1|54|C|1994
6T59|1|54|G|1995
6T59|1|54|C|1996
6T59|1|54|U|1997
6T59|1|54|A|1998
6T59|1|54|A|1999
6T59|1|54|G|2000
6T59|1|54|G|2001
6T59|1|54|A|2002
6T59|1|54|G|2003
6T59|1|54|U|2004
6T59|1|54|G|2005
6T59|1|54|U|2006
6T59|1|54|G|2007
6T59|1|54|U|2008
6T59|1|54|A|2009
6T59|1|54|A|2010
6T59|1|54|C|2011
6T59|1|54|A|2012
6T59|1|54|A|2013
6T59|1|54|C|2014
6T59|1|54|U|2015
6T59|1|54|C|2016
6T59|1|54|A|2017
6T59|1|54|C|2018
6T59|1|54|C|2019
6T59|1|54|U|2020
6T59|1|54|G|2021
6T59|1|54|C|2022
6T59|1|54|C|2023
6T59|1|54|G|2024
6T59|1|54|A|2025
6T59|1|54|A|2026

Current chains

Chain 54: 28S ribosomal RNA

Nearby chains

Chain m3: eL40
Chain s3: uL10
Chain t3: Ribosomal protein L12

IL_6T59_167