IL_6T59_175

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GGAAACGGGGC*GCCCUCUCGCC

Length

22 nucleotides

Bulged bases

6T59|1|54|C|4895, 6T59|1|54|C|4921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|G|4890
6T59|1|54|G|4891
6T59|1|54|A|4892
6T59|1|54|A|4893
6T59|1|54|A|4894
6T59|1|54|C|4895
6T59|1|54|G|4896
6T59|1|54|G|4897
6T59|1|54|G|4898
6T59|1|54|G|4899
6T59|1|54|C|4902
*
6T59|1|54|G|4919
6T59|1|54|C|4920
6T59|1|54|C|4921
6T59|1|54|C|4922
6T59|1|54|U|4923
6T59|1|54|C|4924
6T59|1|54|U|4925
6T59|1|54|C|4926
6T59|1|54|G|4927
6T59|1|54|C|4928
6T59|1|54|C|4929

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain E3

60S ribosomal protein L6

Chain M3

Ribosomal protein L14

Chain O3

uL13