IL_6T7I_239
3D structure
- PDB id
- 6T7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAUAAC*GCUAAUA
- Length
- 13 nucleotides
- Bulged bases
- 6T7I|1|C2|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T7I_239 not in the Motif Atlas
- Geometric match to IL_4LFB_009
- Geometric discrepancy: 0.1986
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_12745.1
- Basepair signature
- cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 1
Unit IDs
6T7I|1|C2|U|144
6T7I|1|C2|A|145
6T7I|1|C2|U|146
6T7I|1|C2|A|147
6T7I|1|C2|A|148
6T7I|1|C2|C|149
*
6T7I|1|C2|G|165
6T7I|1|C2|C|166
6T7I|1|C2|U|167
6T7I|1|C2|A|168
6T7I|1|C2|A|169
6T7I|1|C2|U|170
6T7I|1|C2|A|171
Current chains
- Chain C2
- 18S ribosomal RNA
Nearby chains
- Chain LW
- 60S ribosomal protein L24-B
- Chain SG
- 40S ribosomal protein S6-A
- Chain SY
- 40S ribosomal protein S24-A
Coloring options: