IL_6T7T_112
3D structure
- PDB id
- 6T7T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 6T7T|1|C1|A|2971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T7T_112 not in the Motif Atlas
- Geometric match to IL_2VPL_002
- Geometric discrepancy: 0.2822
- The information below is about IL_2VPL_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
6T7T|1|C1|C|2960
6T7T|1|C1|G|2961
*
6T7T|1|C1|C|2970
6T7T|1|C1|A|2971
6T7T|1|C1|G|2972
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain A
- nascent chain
- Chain LA
- 60S ribosomal protein L2-A
- Chain LI
- 60S ribosomal protein L10
Coloring options: