IL_6T83_033
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6T83|1|1b|G|908, 6T83|1|1b|A|920, 6T83|1|1b|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_033 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.1637
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6T83|1|1b|G|907
6T83|1|1b|G|908
6T83|1|1b|G|909
*
6T83|1|1b|U|919
6T83|1|1b|A|920
6T83|1|1b|A|921
6T83|1|1b|U|922
6T83|1|1b|C|923
Current chains
- Chain 1b
- 25S rRNA
Nearby chains
- Chain Ay
- 60S ribosomal protein L2-A
- Chain Ny
- 60S ribosomal protein L15-A
- Chain Py
- 60S ribosomal protein L17-A
- Chain jb
- 60S ribosomal protein L37-A
Coloring options: