IL_6T83_043
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUCCG*UGA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_043 not in the Motif Atlas
- Geometric match to IL_3TD0_002
- Geometric discrepancy: 0.2918
- The information below is about IL_3TD0_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
6T83|1|1b|U|1014
6T83|1|1b|U|1015
6T83|1|1b|C|1016
6T83|1|1b|C|1017
6T83|1|1b|G|1018
*
6T83|1|1b|U|1034
6T83|1|1b|G|1035
6T83|1|1b|A|1036
Current chains
- Chain 1b
- 25S rRNA
Nearby chains
- Chain Jy
- 60S ribosomal protein L11-A
Coloring options: