IL_6T83_070

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6T83_070 not in the Motif Atlas

Homologous match to IL_8C3A_077

Geometric discrepancy: 0.1188

The information below is about IL_8C3A_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69313.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

6T83|1|1b|U|1694
6T83|1|1b|U|1695
6T83|1|1b|A|1696
6T83|1|1b|A|1697
6T83|1|1b|C|1698
*
6T83|1|1b|G|1747
6T83|1|1b|G|1748
6T83|1|1b|A|1749
6T83|1|1b|A|1750
6T83|1|1b|G|1751
6T83|1|1b|A|1752

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain gy

60S ribosomal protein L34-A

Chain kb

60S ribosomal protein L38