IL_6T83_089

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GCGG*UAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6T83_089 not in the Motif Atlas

Homologous match to IL_8C3A_096

Geometric discrepancy: 0.1721

The information below is about IL_8C3A_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_63450.5

Basepair signature

cWW-cHS-cWW-cWW-cWW

Number of instances in this motif group

7

Unit IDs

6T83|1|1b|G|2391
6T83|1|1b|C|2392
6T83|1|1b|G|2393
6T83|1|1b|G|2394
*
6T83|1|1b|U|2986
6T83|1|1b|A|2987
6T83|1|1b|C|2988

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain By

60S ribosomal protein L3

Chain Oy

60S ribosomal protein L16-A

Chain Py

60S ribosomal protein L17-A