IL_6T83_175
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAAAAAAUU*AUAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_175 not in the Motif Atlas
- Homologous match to IL_4V88_425
- Geometric discrepancy: 0.3124
- The information below is about IL_4V88_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53064.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6T83|1|2b|G|751
6T83|1|2b|A|752
6T83|1|2b|A|753
6T83|1|2b|A|754
6T83|1|2b|A|755
6T83|1|2b|A|756
6T83|1|2b|A|757
6T83|1|2b|U|758
6T83|1|2b|U|759
*
6T83|1|2b|A|791
6T83|1|2b|U|792
6T83|1|2b|A|793
6T83|1|2b|U|794
6T83|1|2b|U|795
6T83|1|2b|A|796
6T83|1|2b|G|797
6T83|1|2b|C|798
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain Eb
- 40S ribosomal protein S4-A
- Chain Jb
- 40S ribosomal protein S9-A
- Chain Lb
- 40S ribosomal protein S11-A
- Chain Wb
- 40S ribosomal protein S22-A
Coloring options: