IL_6T83_217
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 6T83|1|2b|A|1756
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_217 not in the Motif Atlas
- Geometric match to IL_1DUQ_001
- Geometric discrepancy: 0.3474
- The information below is about IL_1DUQ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25872.4
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 5
Unit IDs
6T83|1|2b|C|1644
6T83|1|2b|G|1645
6T83|1|2b|C|1646
6T83|1|2b|U|1647
*
6T83|1|2b|A|1753
6T83|1|2b|A|1754
6T83|1|2b|A|1755
6T83|1|2b|A|1756
6T83|1|2b|G|1757
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain 1b
- Large subunit ribosomal RNA; LSU rRNA
- Chain Xb
- 40S ribosomal protein S23-A
- Chain eb
- 40S ribosomal protein S30-A
- Chain nb
- 60S ribosomal protein L41-A
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